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Systematic Biology 2007 56(4):656-672; doi:10.1080/10635150701549672
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© 2007 Society of Systematic Biologists

Mitochondrial and Nuclear DNA Sequences Support a Cretaceous Origin of Columbiformes and a Dispersal-Driven Radiation in the Paleogene

Sergio L. Pereira1, Kevin P. Johnson2, Dale H. Clayton3 and Allan J. Baker1,4

1 Department of Natural History, Royal Ontario Museum Toronto, Ontario, M5S 2C6, Canada E-mail: sergio.pereira{at}utoronto.ca
2 Illinois Natural History Survey Champaign, Illinois, 61820, USA
3 Department of Biology, University of Utah Salt Lake City, Utah, 84112, USA
4 Department of Ecology and Evolutionary Biology, University of Toronto Toronto, Ontario, M5S 3B2, Canada

Edited by Adrian Paterson: Associate Editor


   Abstract

Phylogenetic relationships among genera of pigeons and doves (Aves, Columbiformes) have not been fully resolved because of limited sampling of taxa and characters in previous studies. We therefore sequenced multiple nuclear and mitochondrial DNA genes totaling over 9000 bp from 33 of 41 genera plus 8 outgroup taxa, and, together with sequences from 5 other pigeon genera retrieved from GenBank, recovered a strong phylogenetic hypothesis for the Columbiformes. Three major clades were recovered with the combined data set, comprising the basally branching New World pigeons and allies (clade A) that are sister to Neotropical ground doves (clade B), and the Afro-Eurasian and Australasian taxa (clade C). None of these clades supports the monophyly of current families and subfamilies. The extinct, flightless dodo and solitaires (Raphidae) were embedded within pigeons and doves (Columbidae) in clade C, and monophyly of the subfamily Columbinae was refuted because the remaining subfamilies were nested within it. Divergence times estimated using a Bayesian framework suggest that Columbiformes diverged from outgroups such as Apodiformes and Caprimulgiformes in the Cretaceous before the mass extinction that marks the end of this period. Bayesian and maximum likelihood inferences of ancestral areas, accounting for phylogenetic uncertainty and divergence times, respectively, favor an ancient origin of Columbiformes in the Neotropical portion of what was then Gondwana. The radiation of modern genera of Columbiformes started in the Early Eocene to the Middle Miocene, as previously estimated for other avian groups such as ratites, tinamous, galliform birds, penguins, shorebirds, parrots, passerine birds, and toucans. Multiple dispersals of more derived Columbiformes between Australasian and Afro-Eurasian regions are required to explain current distributions.

Keywords: Columbiformes; dispersal; divergence times; doves; fossil; K/T boundary; molecular phylogeny; pigeons

Received November 7, 2006; Revised February 26, 2007; Accepted May 19, 2007
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